well-documented Alzheimer's dataset

well-documented Alzheimer's dataset

Datasets

well-documented Alzheimer's dataset

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well-documented Alzheimer's dataset

Use Case

well-documented Alzheimer's dataset

Description

Download the Alzheimer's MRI Dataset sourced from OASIS, featuring 457 individuals' axial MRI scans, skull-stripped for deep learning research.

well-documented Alzheimer's dataset

Description:

This dataset addresses the limitations of existing Alzheimer’s MRI datasets, which often suffer from redundancy and unclear data sources. Unlike many Kaggle datasets, this one is sourced directly from the OASIS (Open Access Series of Imaging Studies) database. It contains a diverse set of MRI images (axial slices) from 457 individuals, each carefully labeled to indicate the corresponding OASIS research phase and individual, ensuring transparency and reliability for researchers.

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Dataset Overview:

  • Total MRI Images: The dataset includes scans from 457 individuals, each with 3 MRI scan NIfTI files.
  • Format: MRI scans were extracted from NIfTI files, converted to PNG format, and processed for cleaner, more accurate analysis.
  • Data Imbalance: The dataset contains an imbalance, so upsampling may be necessary based on specific research needs.
  • Source: Sourced directly from the OASIS database, guaranteeing authenticity and easy citation.

Data Processing:

  1. NIfTI to PNG Conversion: MRI scans from 457 individuals were extracted from 457*4 NIfTI files and converted into PNG format for easy integration into deep learning frameworks.
  2. Skull Stripping: To enhance image quality, skull stripping was applied, removing non-brain tissues and focusing on brain anatomy.
  3. Data Cleanup: I manually removed any images with black regions or incomplete brain displays, ensuring only high-quality, complete MRI scans remain.

Data Quality and Usability:

  • Named Images: Each image is clearly named, allowing users to easily match it with the corresponding OASIS research phase and individual.
  • Manual Cleanup: I carefully filtered out images with incomplete brain displays, ensuring only relevant data remains for research.
  • Batch Processing Considerations: While converting to three-channel images for batch processing, be sure to delete any remaining files (such as ‘brain.nii’ or ‘mask.nii’) manually to avoid errors.

Applications:

  • Alzheimer’s Diagnosis: This dataset is perfect for deep learning researchers aiming to improve the accuracy of Alzheimer’s diagnosis by training AI models on high-quality, well-labeled MRI scans.
  • Medical Imaging: Ideal for developing medical imaging algorithms, especially those focused on detecting neurodegenerative diseases.
  • Research Contribution: If well-received, I plan to release future datasets, including a skull-stripped dataset from ADNI, to further enhance Alzheimer’s research.

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